EpiGEN is an easy-to-use epistasis simulation pipeline written in Python. It supports epistasis models of arbitrary size, the specification of the minor allele frequencies for both noise and disease SNPs, and the simulation of observation bias.
GEDLIB is an easily extensible C++ library for (suboptimally) computing the graph edit distance (GED) between two labeled graphs. GEDLIB implements more than thirty state-of-the-art methods for computing GED and comes with predefined edit costs for some benchmark datasets.
