Topics for Theses

We always have open topics for BSc and MSc theses or projects (see table below). If you’re interested in one of these topics, please contact the supervisor specified in the table. If you do not find an fitting topic in the list but would still like to write your thesis with our lab, you’re very welcome to come up with your own ideas. To propose your own topic, please contact Prof. Dr. David B. Blumenthal.

Topic Category Supervisor
Federated random forests for horizontally partitioned data BSc / MSc Prof. Dr. David B. Blumenthal
Federated inference of gene regulatory networks BSc / MSc Prof. Dr. David B. Blumenthal
An information-theory-informed risk model for federated learning MSc Prof. Dr. David B. Blumenthal
Federated network-constrained patient stratification based on gene expression data BSc / MSc Prof. Dr. David B. Blumenthal
Assessing sex and population biases in computational systems biology BSc / MSc Prof. Dr. David B. Blumenthal
Supervised cancer mechanism extraction based on multi-omics data MSc Prof. Dr. David B. Blumenthal
Assessing reproducibility in computational systems biology BSc / MSc Prof. Dr. David B. Blumenthal
A resource and benchmark for AI-driven predictions of drug-protein interactions BSc / MSc Suryadipto Sarkar, MSc
Development of a manually curated data portal for longitudinal omics data MSc Prof. Dr. David B. Blumenthal
Unsupervised disease module mining based on longirudinal omics data MSc Prof. Dr. David B. Blumenthal